Members
Berend Snel
Professor
Rob de Boer
Professor
Ronald Bontrop
Professor
Paulien Hogeweg
Honorary professor
Bas E Dutilh
PI
Can Kesmir
PI
Kirsten ten Tusscher
PI
Rutger Hermsen
PI
Alexander Schönhuth
Senior researcher
Basten Snoek
Senior researcher
Anet JN Anelone
Post-Doc
working on: mathematical immunology for the EMIICAL project (supervisor: Rob de Boer)
Christiaan van Dorp
Post-Doc
Working on: associations between traits of human infectious diseases and the HLA and KIR genes (supervisor: Can Kesmir)
John van Dam
Post-Doc
Working on: functional genomics and data integration (supervisor: Berend Snel)
Ksenia Arkhipova
Post-Doc
Working on: exploration of viral biodiversity and biology employing metagenomics (supervisor: Bas Dutilh)
Louis Daniel Weise
Post-Doc
Working on: plant root development (supervisor: Kirsten ten Tusscher)
Marleen Balvert
Post-Doc
Working on: computational metagenomics (supervisor: Bas E Dutilh)
FA Bastiaan von Meijenfeldt
PhD candidate
Working on: modelling of metagenomic community dynamics (supervisors: Bas Dutilh, Berend Snel, Paulien Hogeweg)
Bram van Dijk
PhD candidate
Working on: evolution and evolvability in microbial ecosystems (supervisor: Paulien Hogeweg)
Eelco Tromer
PhD candidate
Working on: evolution and function of mitotic kinetochore signalling (supervisor: Berend Snel)
Eva Deutekom
PhD candidate
Hilje Doekes
PhD candidate
Working on: the evolution and dynamics of bacterial interactions (supervisor: Rutger Hermsen)
Jolien van Hooff
PhD candidate
Working on: chromosome segregation: evolution and diversity across eukaryotes (supervisors: Geert Kops (Hubrecht Institute), Berend Snel)
Julian Vosseberg
PhD candidate
Working on: gene duplications during eukaryogenesis (supervisor: Berend Snel)
Juliane Schröter
PhD candidate
Working on: HIV modelling in children, viral and immune system dynamics associated with response to ART (supervisor: Rob de Boer)
Laurens Krah
PhD candidate
Working on: autocorrelations between mutations, effects of stochasticity of protein expression on bacterial growth (supervisor: Rutger Hermsen)
Leny van Wijk
PhD candidate
Working on: kinase evolution and function (supervisor: Berend Snel)
Margo Schuller
PhD candidate
Patrick de Jonge
PhD candidate
Working on: high troughput phage identification methods (supervisors: Bas Dutilh, Stan Brouns (TU Delft), Berend Snel)
Peter de Greef
PhD candidate
Working on: dynamics of immune repertoires (supervisor: Rob de Boer)
Thea van den Berg
PhD candidate
Working on: root system adaptation (supervisor: Kirsten ten Tussher)
Alessandro Rossi
MSc student
Working on: pangenomics and phylogenetics of the crAssphage virus (supervisor: Bas E Dutilh)
Divyae Prasad
MSc student
Working on: phage-host prediction (supervisor: Bas E Dutilh and John van Dam)
Glenn Mulder
MSc student
Working on: Temperate phage decision-making through individual-based evolutionary modelling (supervisor: Rutger Hermsen)
Ianthe van Belzen
MSc student
Working on: quantification of protein repeat evolution (supervisor: Berend Snel, Eva Deutekom)
Jeroen Meijer
MSc student
Working on: modelling horizontal gene transfer (supervisors: Bram van Dijk, Paulien Hogeweg)
Joep Meeuwissen
MSc student
Working on: developing methods and guidelines for in sillicon analysis of cancer genomics in personalised immunotherapy (supervisors: Can Kesmier and Bas Dutilh)
Karim hajji
MSc student
Working on: Modelling evolving gene networks (supervisor: Paulien Hogeweg)
Kasper Soekarjo
MSc student
Working on: Topology of the reticular network in lymph nodes (supervisor: Rob de Boer)
Laura Veerkamp
MSc student
Working on: Noise propagation in an optimized metabolic network (supervisors: Rutger Hermsen, Laurens Krah)
Marten Kerkhofs
MSc student
Working on: lymphocyte modelling in tumours
Reinder Bosman
MSc student
Working on: nucleotide management in the RNA world (supervisor: Paulien Hogeweg)
Sam von der Dunk
MSc student
Working on: symmetry breaking in RNA-like replicators (supervisors: Enrico Sandro Colizzi, Paulien Hogeweg)
