Slides of the lectures
Introduction lecture
lecture tree basics from master course introduction to bioinformatics
lecture gene trees from master course introduction to bioinformatics
Lecture gene trees, orthology and duplication
Large Scale / Automatic Orthology Methods and Databases
Lecture homology and protein domains
LECA, eukaryogenesis
Key Genomes, Eukaryotic Tree of Life, HGT, Endosymbiosis
Whole Genome Duplication
Orthologs conserve function and paralogs change function
Discordant phylogenetic profiles and evolution of regulation