Toward
a theory of multilevel evolution: long-term information integration
shapes the mutational landscape and enhances evolvability.
Hogeweg P.
chapter 10 of Soyer, O.S. (ed.) Evolutionary Systems Biology, Springer (2012)
and MEDLINE
Adv Exp Med Biol. 2012;751:195-224
Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life.
Takeuchi N, Hogeweg P.
Phys Life Rev. 2012 Jun 13. [Epub ahead of print]
Reply
to the commentaries on "Evolutionary dynamics of RNA-like replicator
systems: A bioinformatic approach to the origin of life"
Takeuchi N, Hogeweg P.
Phys Life Rev. 2012 Jul 27. [Epub ahead of print]
Gene duplications contribute to the overrepresentation of interactions between proteins of a similar age.
Fokkens L, Hogeweg P, Snel B.
BMC Evol Biol. 2012 Jun 25;12(1):99. [Epub ahead of print]
Morphogengineering roots: comparing mechanisms of morphogen gradient formation.
Grieneisen VA, Scheres B, Hogeweg P, Maree AF.
BMC Syst Biol. 2012 May 14;6(1):37. [Epub ahead of print]
Less can be more: RNA-adapters may enhance coding capacity of replicators
de Boer FK, Hogeweg P.
PLoS One. 2012;7(1):e29952. Epub 2012 Jan 23.
Virtual genomes in flux: an interplay of neutrality and adaptability explains genome expansion and streamlining.
Cuypers TD, Hogeweg P
Genome Biol Evol. 2012;4(3):212-29. Epub 2012 Jan 10
Evolution of networks for body plan patterning; interplay of modularity, robustness and evolvability.
Ten Tusscher KH, Hogeweg P.
PLoS Comput Biol. 2011 Oct;7(10):e1002208. Epub 2011 Oct 6.
The roots of bioinformatics in theoretical biology.
Hogeweg P.
PLoS Comput Biol. 2011 Mar;7(3):e1002021. Epub 2011 Mar 31.
On the origin of DNA genomes: evolution of the division of labor between template and catalyst in model replicator systems.
Takeuchi N, Hogeweg P, Koonin EV.
PLoS Comput Biol. 2011 Mar;7(3):e1002024. Epub 2011 Mar 24.
Modelling the dynamics of viral suppressors of RNA silencing.
Groenenboom MA, Hogeweg P.
J R Soc Interface. 2012 Mar 7;9(68):436-47. Epub 2011 Aug 17
Is RNA-dependent RNA polymerase essential for transposon control?
Crombach A, Hogeweg P.
BMC Syst Biol. 2011 Jun 29;5:104.
Eco-evolutionary dynamics, coding structure and the information threshold.
de Boer FK, Hogeweg P.
BMC Evol Biol. 2010 Nov 24;10:361